BiaPy
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Get started

  • Installation
  • How it works
  • Configuration
  • Select workflow
  • FAQ

Workflows

  • Semantic segmentation
  • Instance segmentation
  • Detection
  • Denoising
  • Super-resolution
  • Self-supervision
  • Classification

Tutorials

  • Stable DNN architectures for mitochondria segmentation
  • CartoCell, a high-throughput pipeline for accurate 3D image analysis
  • MitoEM dataset: large-scale 3d mitochondria instance segmentation
  • NucMM dataset: 3d neuronal nuclei instance segmentation

How to contribute

  • General guidelines
  • Add new workflow
  • Add pre/post processing

API

  • config
  • data
  • engine
  • models
    • Init
    • U-Net like models
    • Transformers
    • EDSR
    • WDSR
    • RCAN
    • DFCAN
    • EfficientNet
    • Simple CNN
  • utils

Bibliography

  • Bibliography
BiaPy
  • »
  • models
  • Edit on GitHub

modelsΒΆ

  • Init
  • U-Net like models
  • Transformers
  • EDSR
  • WDSR
  • RCAN
  • DFCAN
  • EfficientNet
  • Simple CNN
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© Copyright 2023, Daniel Franco-Barranco. Revision 5e89cda6.

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